6. Post-process and qa

• 6.1. Post-process CMAQ and Install R
  • 6.1.1. Scripts to run combine and post processing
    • Build the POST processing routines
    • Scripts to post-process CMAQ output
    • Edit, Build and Run the POST processing routines
  • 6.1.2. Install R, Rscripts and Packages
• 6.2. QA CMAQ
  • 6.2.1. Quality Assurance
  • 6.2.2. Run m3diff to compare the output data for two runs that have different values for NPCOL
  • 6.2.3. Use m3diff to compare two runs that have the same NPCOL
  • 6.2.4. Run an R script to create the box plots and spatial plots comparing the output of two runs
• 6.3. Compare Timing of CMAQ Routines
  • 6.3.1. Parse timings from the log file
    • Compare the timings for the CONUS ParallelCluster Runs
    • Edit the R script
      • Run parse_timing.r script to examine timings of each science process in CMAQ
• 6.4. Copy Output to S3 Bucket
  • 6.4.1. Copy Output Data and Run script logs to S3 Bucket
  • 6.4.2. Copy scripts and logs to /fsx
  • 6.4.3. Examine the output files
  • 6.4.4. Copy the output to an S3 Bucket